vegan - Community Ecology Package

Ordination methods, diversity analysis and other functions for community and vegetation ecologists.

Last updated

ecological-modellingecologyordinationopenblasfortran

19.86 score 533 stars 504 dependents 25k scripts 147k downloads

lmodel2 - Model II Regression

Computes model II simple linear regression using ordinary least squares (OLS), major axis (MA), standard major axis (SMA), and ranged major axis (RMA).

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8.78 score 3 stars 4 dependents 331 scripts 10k downloads

vegan3d - Static and Dynamic 3D and Editable Interactive Plots for the 'vegan' Package

Static and dynamic 3D plots to be used with ordination results and in diversity analysis, especially with the vegan package.

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6.21 score 19 stars 1 dependents 95 scripts 751 downloads

natto - An Extreme 'vegan' Package of Experimental Code

Random code that is too experimental or too weird to be included in the vegan package.

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4.95 score 9 stars 1 scripts

twinspan - Two-Way Indicator Species Analysis

Classification of biological communities based on splitting first axis of Correspondence Analysis for the current subset of the data, and finding species that best indicate the splits. The method is particularly popular in vegetation science.

Last updated

4.48 score 8 stars 19 scripts

cepreader - Read 'CEP' and Legacy 'CANOCO' Files

Read Condensed Cornell Ecology Program ('CEP') and legacy 'CANOCO' files into R data frames.

Last updated

3.60 score 1 scripts 184 downloads

GO - Gaussian Ordination and Community Simulation

Functions used to produce a manuscript on Unconstrained Gaussian Ordination.

Last updated

3.05 score 111 scripts

gravy - Gradient Analysis of Vegetation

Experimental tools for gradient analysis of community data. Most of the functionality is now included in package 'eHOF', but there are still some divergent features.

Last updated

2.18 score 3 stars